Title: Neuroinflammatory astrocyte subtypes in the mouse brain
Authors: Philip Hasel, Indigo V. L. Rose, Jessica S. Sadick, Rachel D. Kim & Shane A. Liddelow
Date published: 8/19/21
Date added: 5/1/22
Journal: Nature Neuroscience
DOI: 10.1038/s41593-021-00905-6
Protocol: 10x Genomics Visium
Data source: GSE165098
Species: mouse
Number of samples: 6
Region: Whole brain
Figure: Astrocytes undergo a fast inflammatory transition that drastically changes over time.
Select sample:
Current selection:
ssREAD sample ID:
Sample raw name:
Total spots in the plot: 582
Clusters to plot:
Point size:
Point opacity:
Gene expression
Please enter a gene symbol.
Sample:
Log2 fold-change cutoff:
Adjusted p-value cutoff:
Sorry, no SVGs found.
|
Sample:
Note: The MAST package were used to calculate DEGs on normalized gene expression data (parameter: log2FC > 0.25, adj.p-value < 0.05).
Group:
Cluster:
Log2 fold-change cutoff:
Adjusted p-value cutoff:
Sorry. No differentially expressed genes are available to present.
|