Title: Integrative in situ mapping of single-cell transcriptional states and tissue histopathology in a mouse model of Alzheimers disease
Authors: Hu Zeng, Jiahao Huang, Haowen Zhou, William J Meilandt, Borislav Dejanovic, Yiming Zhou, Christopher J Bohlen, Seung-Hye Lee, Jingyi Ren, Albert Liu, Zefang Tang, Hao Sheng, Jia Liu, Morgan Sheng, Xiao Wang
Date published: 2/2/23
Date added: 12/1/23
Journal: Nature Neuroscience
DOI: 10.1038/s41593-022-01251-x
Protocol: STARmap PLUS
Data source: SCP1375
Species: mouse
Number of samples: 12
Region: Hippocampus, cerebellum
Figure: Simultaneous mapping of cell types, single-cell transcriptional states and tissue histopathology by STARmap PLUS.
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Note: The MAST package were used to calculate DEGs on normalized gene expression data (parameter: log2FC > 0.25, adj.p-value < 0.05).
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